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Ocean Protein Portal Updates METATRYP to Encompass COVID-19 Peptides Data
EarthCube project researchers from Woods Hole Oceanographic Institution recently published their study findings related to SARS-CoV-2 coronavirus peptides in the Journal of Proteome Research. Specifically, the scientists discussed how SARS-CoV-2 has the most shared tryptic peptides with its closest bat precursor virus and while the COVID-19 strain has some shared peptides with SARS-CoV-1, it is very different from the “common influenza”.
EarthCube’s PBOT Enables Scientists and Educators Access to Paleobotany Data
Detailed information about ancient vegetation has long been a mystery, and often when it is discovered, accessing the data is difficult - if even possible. However, a new EarthCube project team has recently begun development of a unique web client and database coined PBOT, short for Paleobotany Database, that aims to provide both scientists and educators easy access to a long awaited paleobotany database.
EarthCube Tool “Sparrow” Allows Geoscientists to Easily Share and Archive Data
Primarily known as a diverse but recognizable family of birds that are friendly and able to naturally blend into human environments, “Sparrow” is quite fitting for the user-friendly tool being developed by EarthCube’s Geochronology project. “Sparrow” has specifically been developed to assist laboratories in managing their analytical data products while at the same time creating metadata and seamlessly exposing lab products to end-users and archival data facilities.
Graduate Students Contribute a Novel Open-Source Forecasting Verification Tool to the Pangeo Community
Riley Brady, graduate student at University of Colorado at Boulder, and Aaron Spring, graduate student at the Max Planck Institute in Hamburg, Germany, recently collaborated to create an open-source python-based Pangeo library that allows worldwide researchers to easily analyze forecasts using weather and climate models. Coined “climpred” (climate prediction), the new tool has been developed in conjunction with EarthCube’s Pangeo community so that geoscientists can post-process, analyze, and visualize the results of climate prediction systems.
EarthCube Initiative Develops Tool to Study Greenland and its Melting Ice Sheet
Greenland, the world’s largest island, has long been known as a sparsely populated, ice-capped home for polar bears, reindeer, and Arctic foxes. The Greenland Ice Sheet covers more than 80 percent of the island – stretching some 1500 miles long by 460 miles wide. However, conditions in Greenland are changing rapidly. According to NOAA’s Arctic Report Card, last year’s ice melt was similar to the alarming ice loss of 2012, and the ice sheet has lost ice every year for the last two decades.
EarthCube Project Creates Data Broker to Share Information about Novel Volcano in Tanzania
Considered young in comparison to other volcanoes, Ol Doinyo Lengai has been viewed as a petrological mystery since its first recorded eruption in the late 1800s. While typical terrestrial magma consists of silicon and oxygen, Ol Doinyo Lengai erupts carbonatite magma. Monitoring this volcano’s inflation and deflation in real-time has been one of the case-studies for the National Science Foundation (NSF)-funded EarthCube project CHORDS (Cloud-Hosted Real-time Data Services for the Geosciences) for several years. Scientists from Virginia Tech, Ardhi University in Tanzania, and the Korea Institute for Geosciences and Mineral Resources (KIGAM) researchers set up the monitoring project to better understand the East African Rift and the hazards of the volcano.
Because 70 percent of Earth is comprised of oceans, their changes have a great impact on our entire planet. Many oceanographic changes often go unnoticed for years, decades, and sometimes centuries; however, slight variances in sea microbes (microscopic organisms) can provide researchers with tremendous insight to long-term change.
EarthCube’s StraboSpot Develops Digital Tools for Geosciences Educators
In mid-March, EarthCube’s StraboSpot team realized that their summer field camps were unlikely to occur as the world shut down due to the COVID-19 pandemic. The StraboSpot team organized the initial community-based response to best determine how to share resources to deal with the near-certainty of canceled field camps. By mid-April, the researchers had teamed with multiple other community members to offer a variety of virtual field experiences, including repackaging and utilizing StraboSpot for online learning.